CRAN Package Check Results for Package DeLorean

Last updated on 2020-04-10 03:49:20 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.5.0 457.43 314.51 771.94 NOTE
r-devel-linux-x86_64-debian-gcc 1.5.0 433.38 254.02 687.40 NOTE
r-devel-linux-x86_64-fedora-clang 1.5.0 1060.85 NOTE
r-devel-linux-x86_64-fedora-gcc 1.5.0 1227.76 NOTE
r-devel-windows-ix86+x86_64 1.5.0 807.00 414.00 1221.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.5.0 759.00 357.00 1116.00 NOTE
r-patched-linux-x86_64 1.5.0 435.50 336.18 771.68 NOTE
r-patched-osx-x86_64 1.5.0 WARN
r-patched-solaris-x86 1.5.0 1120.30 NOTE
r-release-linux-x86_64 1.5.0 0.01 3.51 3.52 ERROR
r-release-windows-ix86+x86_64 1.5.0 819.00 493.00 1312.00 NOTE
r-release-osx-x86_64 1.5.0 NOTE
r-oldrel-windows-ix86+x86_64 1.5.0 892.00 528.00 1420.00 NOTE
r-oldrel-osx-x86_64 1.5.0 NOTE

Check Details

Version: 1.5.0
Check: for GNU extensions in Makefiles
Result: NOTE
    GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-osx-x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.5.0
Check: installed package size
Result: NOTE
     installed size is 87.3Mb
     sub-directories of 1Mb or more:
     libs 84.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-osx-x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.5.0
Check: top-level files
Result: NOTE
    ‘configure’: /bin/bash is not portable
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.5.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘lattice’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-osx-x86_64, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.5.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘DeLorean.Rmd’ using rmarkdown
    Loading required package: Rcpp
    - For execution on a local, multicore CPU with excess RAM we recommend calling
    options(mc.cores = parallel::detectCores())
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Joining, by = "gene"
    Joining, by = "cell"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "cell"
    Joining, by = c("cell", "capture")
    Have 35 cells after filtering
    Joining, by = "cell"
    Have 20 genes after filtering
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "gene"
    Joining, by = "cell"
    Joining, by = c("cell", "capture")
    TSP:scaled:none:1; time=0.167s; LL=-3292.80601928261
    R2E:scaled:none:1; time=0.178999999999999s; LL=-3311.24079711502
    HC:scaled:none:1; time=0.00199999999999978s; LL=-3416.05125553763
    GW:scaled:none:1; time=0.00399999999999956s; LL=-3270.23402973999
    OLO:scaled:none:1; time=0.00200000000000067s; LL=-3277.62670606703
    TSP:unscaled:none:1; time=0.00800000000000001s; LL=-3271.71648171947
    R2E:unscaled:none:1; time=0.00399999999999956s; LL=-3384.27364894219
    HC:unscaled:none:1; time=0.00199999999999978s; LL=-3430.23305461131
    GW:unscaled:none:1; time=0.00199999999999978s; LL=-3296.33185650881
    OLO:unscaled:none:1; time=0.00199999999999978s; LL=-3282.34737853602
    TSP:scaled:pca:1; time=0.00600000000000023s; LL=-3545.16608963334
    R2E:scaled:pca:1; time=0.00600000000000023s; LL=-3545.16608963334
    HC:scaled:pca:1; time=0.00199999999999978s; LL=-3451.55161136364
    GW:scaled:pca:1; time=0.00199999999999978s; LL=-3481.8123916018
    OLO:scaled:pca:1; time=0.000999999999999446s; LL=-3481.8123916018
    TSP:unscaled:pca:1; time=0.00400000000000045s; LL=-3428.17761097241
    R2E:unscaled:pca:1; time=0.00700000000000056s; LL=-3486.6998599079
    HC:unscaled:pca:1; time=0.000999999999999446s; LL=-3482.83861469183
    GW:unscaled:pca:1; time=0.00300000000000011s; LL=-3428.17761097241
    OLO:unscaled:pca:1; time=0.00600000000000023s; LL=-3428.17761097241
    TSP:scaled:ica:1; time=0.0110000000000001s; LL=-3504.71591138961
    R2E:scaled:ica:1; time=0.0120000000000005s; LL=-3545.16608963334
    HC:scaled:ica:1; time=0.00100000000000033s; LL=-3451.55161136364
    GW:scaled:ica:1; time=0.00199999999999978s; LL=-3481.8123916018
    OLO:scaled:ica:1; time=0.00200000000000067s; LL=-3481.8123916018
    TSP:unscaled:ica:1; time=0.00300000000000011s; LL=-3497.87392378131
    R2E:unscaled:ica:1; time=0.00999999999999979s; LL=-3486.6998599079
    HC:unscaled:ica:1; time=0.00100000000000033s; LL=-3482.83861469183
    GW:unscaled:ica:1; time=0.00199999999999978s; LL=-3428.17761097241
    OLO:unscaled:ica:1; time=0.00499999999999989s; LL=-3428.17761097241
    TSP:scaled:mds:1; time=0.0129999999999999s; LL=-3481.8123916018
    R2E:scaled:mds:1; time=0.00400000000000045s; LL=-3545.16608963334
    HC:scaled:mds:1; time=0.00199999999999978s; LL=-3451.55161136364
    GW:scaled:mds:1; time=0.00199999999999978s; LL=-3481.8123916018
    OLO:scaled:mds:1; time=0.00600000000000023s; LL=-3481.8123916018
    TSP:unscaled:mds:1; time=0.00899999999999945s; LL=-3447.26512981099
    R2E:unscaled:mds:1; time=0.00300000000000011s; LL=-3486.6998599079
    HC:unscaled:mds:1; time=0.0129999999999999s; LL=-3482.83861469183
    GW:unscaled:mds:1; time=0.00199999999999978s; LL=-3428.17761097241
    OLO:unscaled:mds:1; time=0.000999999999999446s; LL=-3428.17761097241
    TSP:scaled:pca:2; time=0.00400000000000045s; LL=-3296.74802273889
    R2E:scaled:pca:2; time=0.00800000000000001s; LL=-3342.01281947973
    HC:scaled:pca:2; time=0.00199999999999978s; LL=-3427.08601324949
    GW:scaled:pca:2; time=0.00199999999999978s; LL=-3444.81795093568
    OLO:scaled:pca:2; time=0.00199999999999978s; LL=-3329.63290676209
    TSP:unscaled:pca:2; time=0.00399999999999956s; LL=-3376.50567862685
    R2E:unscaled:pca:2; time=0.00400000000000045s; LL=-3331.27374865332
    HC:unscaled:pca:2; time=0.00199999999999978s; LL=-3458.25535944892
    GW:unscaled:pca:2; time=0.00200000000000067s; LL=-3362.11617113879
    OLO:unscaled:pca:2; time=0.0080000000000009s; LL=-3295.35554754089
    TSP:scaled:kfa:2; time=0.651s; LL=-3493.44739184212
    R2E:scaled:kfa:2; time=0.621s; LL=-3546.94336146276
    HC:scaled:kfa:2; time=0.000999999999999446s; LL=-3496.86027403142
    GW:scaled:kfa:2; time=0.00399999999999956s; LL=-3459.93736012894
    OLO:scaled:kfa:2; time=0.000999999999999446s; LL=-3412.16798372367
    TSP:unscaled:kfa:2; time=0.00699999999999967s; LL=-3441.52351315409
    R2E:unscaled:kfa:2; time=0.016s; LL=-3588.78889930164
    HC:unscaled:kfa:2; time=0.00100000000000122s; LL=-3505.19323273521
    GW:unscaled:kfa:2; time=0.011000000000001s; LL=-3517.69363381675
    OLO:unscaled:kfa:2; time=0.00199999999999889s; LL=-3420.0924013532
    TSP:scaled:ica:2; time=0.0140000000000011s; LL=-3364.57604677811
    R2E:scaled:ica:2; time=0.00500000000000078s; LL=-3371.293321054
    HC:scaled:ica:2; time=0.00200000000000067s; LL=-3392.30842325071
    GW:scaled:ica:2; time=0.00200000000000067s; LL=-3364.4998378757
    OLO:scaled:ica:2; time=0.00200000000000067s; LL=-3336.50294709466
    TSP:unscaled:ica:2; time=0.00400000000000134s; LL=-3301.37451972715
    R2E:unscaled:ica:2; time=0.00400000000000134s; LL=-3365.03650457421
    HC:unscaled:ica:2; time=0.00600000000000023s; LL=-3453.84396455789
    GW:unscaled:ica:2; time=0.00200000000000067s; LL=-3318.36434217602
    OLO:unscaled:ica:2; time=0.000999999999999446s; LL=-3286.30898511022
    TSP:scaled:mds:2; time=0.0129999999999999s; LL=-3295.44931780532
    R2E:scaled:mds:2; time=0.00399999999999956s; LL=-3342.01281947973
    HC:scaled:mds:2; time=0.00100000000000122s; LL=-3427.08601324949
    GW:scaled:mds:2; time=0.00200000000000067s; LL=-3444.81795093568
    OLO:scaled:mds:2; time=0.000999999999999446s; LL=-3329.63290676209
    TSP:unscaled:mds:2; time=0.00499999999999901s; LL=-3291.18957578614
    R2E:unscaled:mds:2; time=0.0150000000000006s; LL=-3331.27374865332
    HC:unscaled:mds:2; time=0.00599999999999845s; LL=-3458.25535944892
    GW:unscaled:mds:2; time=0.00199999999999889s; LL=-3362.11617113879
    OLO:unscaled:mds:2; time=0.000999999999999446s; LL=-3295.35554754089
    TSP:scaled:pca:4; time=0.00300000000000011s; LL=-3280.68750465052
    R2E:scaled:pca:4; time=0.00600000000000023s; LL=-3315.9005300663
    HC:scaled:pca:4; time=0.000999999999999446s; LL=-3391.31435197622
    GW:scaled:pca:4; time=0.00100000000000122s; LL=-3277.91507296487
    OLO:scaled:pca:4; time=0.00200000000000067s; LL=-3281.39662566005
    TSP:unscaled:pca:4; time=0.00300000000000011s; LL=-3300.12935184944
    R2E:unscaled:pca:4; time=0.00300000000000011s; LL=-3379.71705115576
    HC:unscaled:pca:4; time=0.00199999999999889s; LL=-3398.91594702779
    GW:unscaled:pca:4; time=0.00200000000000067s; LL=-3298.34166931658
    OLO:unscaled:pca:4; time=0.00200000000000067s; LL=-3276.95026535267
    TSP:scaled:kfa:4; time=0.0169999999999995s; LL=-3359.11573056381
    R2E:scaled:kfa:4; time=0.0129999999999999s; LL=-3543.20561306971
    HC:scaled:kfa:4; time=0.00300000000000011s; LL=-3374.20666067958
    GW:scaled:kfa:4; time=0.00900000000000034s; LL=-3400.02576486636
    OLO:scaled:kfa:4; time=0.00200000000000067s; LL=-3375.84171575797
    TSP:unscaled:kfa:4; time=0.00599999999999845s; LL=-3474.57847067844
    R2E:unscaled:kfa:4; time=0.0169999999999995s; LL=-3602.49984149112
    HC:unscaled:kfa:4; time=0.000999999999999446s; LL=-3452.19200945079
    GW:unscaled:kfa:4; time=0.00999999999999979s; LL=-3485.02124562306
    OLO:unscaled:kfa:4; time=0.00999999999999979s; LL=-3515.35046118661
    TSP:scaled:ica:4; time=0.00599999999999845s; LL=-3306.17456362348
    R2E:scaled:ica:4; time=0.00600000000000023s; LL=-3347.28127241422
    HC:scaled:ica:4; time=0.000999999999999446s; LL=-3423.60525128498
    GW:scaled:ica:4; time=0.00200000000000067s; LL=-3391.90831739095
    OLO:scaled:ica:4; time=0.00200000000000067s; LL=-3296.23141347569
    TSP:unscaled:ica:4; time=0.00600000000000023s; LL=-3329.9813633134
    R2E:unscaled:ica:4; time=0.00599999999999845s; LL=-3352.45704392997
    HC:unscaled:ica:4; time=0.00699999999999967s; LL=-3514.92297737817
    GW:unscaled:ica:4; time=0.000999999999999446s; LL=-3416.04438133223
    OLO:unscaled:ica:4; time=0.00200000000000067s; LL=-3296.95097096948
    TSP:scaled:mds:4; time=0.00399999999999956s; LL=-3278.62520464887
    R2E:scaled:mds:4; time=0.0109999999999992s; LL=-3315.9005300663
    HC:scaled:mds:4; time=0.00100000000000122s; LL=-3391.31435197622
    GW:scaled:mds:4; time=0.00199999999999889s; LL=-3277.91507296487
    OLO:scaled:mds:4; time=0.000999999999999446s; LL=-3281.39662566005
    TSP:unscaled:mds:4; time=0.00300000000000011s; LL=-3300.12935184944
    R2E:unscaled:mds:4; time=0.00399999999999956s; LL=-3379.71705115576
    HC:unscaled:mds:4; time=0.00100000000000122s; LL=-3398.91594702779
    GW:unscaled:mds:4; time=0.00199999999999889s; LL=-3298.34166931658
    OLO:unscaled:mds:4; time=0.00200000000000067s; LL=-3276.95026535267
    TSP:scaled:pca:8; time=0.0150000000000006s; LL=-3296.51130577766
    R2E:scaled:pca:8; time=0.00500000000000078s; LL=-3320.27956181248
    HC:scaled:pca:8; time=0.00799999999999912s; LL=-3423.07925958223
    GW:scaled:pca:8; time=0.000999999999999446s; LL=-3284.63455286312
    OLO:scaled:pca:8; time=0.00200000000000067s; LL=-3270.29974409599
    TSP:unscaled:pca:8; time=0.00300000000000011s; LL=-3281.89669885481
    R2E:unscaled:pca:8; time=0.00600000000000023s; LL=-3374.98242189628
    HC:unscaled:pca:8; time=0.0129999999999999s; LL=-3406.52603969785
    GW:unscaled:pca:8; time=0.00699999999999967s; LL=-3292.30345826113
    OLO:unscaled:pca:8; time=0.00200000000000067s; LL=-3297.79856524544
    TSP:scaled:kfa:8; time=0.0149999999999988s; LL=-3356.43875941128
    R2E:scaled:kfa:8; time=0.0129999999999999s; LL=-3376.33567218507
    HC:scaled:kfa:8; time=0.00100000000000122s; LL=-3475.47803209761
    GW:scaled:kfa:8; time=0.00200000000000067s; LL=-3370.582186829
    OLO:scaled:kfa:8; time=0.00300000000000011s; LL=-3307.66218179397
    TSP:unscaled:kfa:8; time=0.00699999999999967s; LL=-3293.29582548919
    R2E:unscaled:kfa:8; time=0.0180000000000007s; LL=-3562.34404871926
    HC:unscaled:kfa:8; time=0.000999999999999446s; LL=-3437.04041076489
    GW:unscaled:kfa:8; time=0.00199999999999889s; LL=-3365.62490207515
    OLO:unscaled:kfa:8; time=0.00100000000000122s; LL=-3296.64417683896
    R2E:scaled:ica:8; time=0.0700000000000003s; LL=-3579.99973534783
    TSP:scaled:ica:8; time=0.0690000000000026s; LL=-3506.28142267755
    HC:scaled:ica:8; time=0.00200000000000244s; LL=-3584.05094084449
    GW:scaled:ica:8; time=0.00200000000000244s; LL=-3480.66388017835
    OLO:scaled:ica:8; time=0.0069999999999979s; LL=-3545.03622991261
    TSP:unscaled:ica:8; time=0.0210000000000008s; LL=-3438.92242898124
    HC:unscaled:ica:8; time=0.014999999999997s; LL=-3558.30194982882
    R2E:unscaled:ica:8; time=0.0470000000000006s; LL=-3558.04142117955
    OLO:unscaled:ica:8; time=0.00900000000000034s; LL=-3457.50443813808
    GW:unscaled:ica:8; time=0.00100000000000122s; LL=-3522.34261220176
    R2E:scaled:mds:8; time=0.00400000000000134s; LL=-3320.27956181248
    TSP:scaled:mds:8; time=0.00300000000000011s; LL=-3292.5868073714
    HC:scaled:mds:8; time=0.00100000000000122s; LL=-3423.07925958223
    GW:scaled:mds:8; time=0.00199999999999889s; LL=-3284.63455286312
    OLO:scaled:mds:8; time=0.00300000000000011s; LL=-3270.29974409599
    TSP:unscaled:mds:8; time=0.0109999999999992s; LL=-3277.69865742882
    HC:unscaled:mds:8; time=0.00100000000000122s; LL=-3406.52603969785
    R2E:unscaled:mds:8; time=0.00400000000000134s; LL=-3374.98242189628
    GW:unscaled:mds:8; time=0.00100000000000122s; LL=-3292.30345826113
    OLO:unscaled:mds:8; time=0.00199999999999889s; LL=-3297.79856524544
    Using ordering GW:scaled:none:1; LL=-3270.23402973999
    Using ordering OLO:scaled:pca:8; LL=-3270.29974409599
    Joining, by = "c"
    Joining, by = c("iter", "g")
    Joining, by = "g"
    Joining, by = "g"
    Joining, by = c("iter", "g", "t")
    Joining, by = "g"
    Joining, by = "g"
    Joining, by = c("gene", "phi.hat")
    Joining, by = "g"
    Joining, by = "c"
    Joining, by = c("c", "iter")
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'DeLorean.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘DeLorean.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘DeLorean.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 1.5.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-release-linux-x86_64