CRAN Package Check Results for Package anyLib

Last updated on 2019-11-15 02:48:54 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.5 2.05 209.53 211.58 OK
r-devel-linux-x86_64-debian-gcc 1.0.5 1.84 157.32 159.16 OK
r-devel-linux-x86_64-fedora-clang 1.0.5 234.89 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.5 216.85 NOTE
r-devel-windows-ix86+x86_64 1.0.5 15.00 112.00 127.00 OK
r-patched-linux-x86_64 1.0.5 1.70 180.39 182.09 OK
r-patched-solaris-x86 1.0.5 284.70 WARN
r-release-linux-x86_64 1.0.5 1.68 181.62 183.30 OK
r-release-windows-ix86+x86_64 1.0.5 6.00 204.00 210.00 OK
r-release-osx-x86_64 1.0.5 WARN
r-oldrel-windows-ix86+x86_64 1.0.5 3.00 75.00 78.00 OK
r-oldrel-osx-x86_64 1.0.5 WARN

Check Details

Version: 1.0.5
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘curl’ ‘httr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘help.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    trying URL 'https://cloud.r-project.org/src/contrib/ps_1.3.0.tar.gz'
    Content type 'application/x-gzip' length 261887 bytes (255 KB)
    ==================================================
    downloaded 255 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/processx_3.4.1.tar.gz'
    Content type 'application/x-gzip' length 123430 bytes (120 KB)
    ==================================================
    downloaded 120 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/callr_3.3.2.tar.gz'
    Content type 'application/x-gzip' length 94404 bytes (92 KB)
    ==================================================
    downloaded 92 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/prettyunits_1.0.2.tar.gz'
    Content type 'application/x-gzip' length 8262 bytes
    ==================================================
    downloaded 8262 bytes
    
    trying URL 'https://cloud.r-project.org/src/contrib/backports_1.1.5.tar.gz'
    Content type 'application/x-gzip' length 14798 bytes (14 KB)
    ==================================================
    downloaded 14 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/assertthat_0.2.1.tar.gz'
    Content type 'application/x-gzip' length 12742 bytes (12 KB)
    ==================================================
    downloaded 12 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/desc_1.2.0.tar.gz'
    Content type 'application/x-gzip' length 65612 bytes (64 KB)
    ==================================================
    downloaded 64 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/pkgbuild_1.0.6.tar.gz'
    Content type 'application/x-gzip' length 29322 bytes (28 KB)
    ==================================================
    downloaded 28 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/rprojroot_1.3-2.tar.gz'
    Content type 'application/x-gzip' length 50414 bytes (49 KB)
    ==================================================
    downloaded 49 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/rstudioapi_0.10.tar.gz'
    Content type 'application/x-gzip' length 61888 bytes (60 KB)
    ==================================================
    downloaded 60 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/cli_1.1.0.tar.gz'
    Content type 'application/x-gzip' length 40232 bytes (39 KB)
    ==================================================
    downloaded 39 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/crayon_1.3.4.tar.gz'
    Content type 'application/x-gzip' length 658694 bytes (643 KB)
    ==================================================
    downloaded 643 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/digest_0.6.22.tar.gz'
    Content type 'application/x-gzip' length 141968 bytes (138 KB)
    ==================================================
    downloaded 138 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/ellipsis_0.3.0.tar.gz'
    Content type 'application/x-gzip' length 7371 bytes
    ==================================================
    downloaded 7371 bytes
    
    trying URL 'https://cloud.r-project.org/src/contrib/evaluate_0.14.tar.gz'
    Content type 'application/x-gzip' length 24206 bytes (23 KB)
    ==================================================
    downloaded 23 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/magrittr_1.5.tar.gz'
    Content type 'application/x-gzip' length 200504 bytes (195 KB)
    ==================================================
    downloaded 195 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/pkgload_1.0.2.tar.gz'
    Content type 'application/x-gzip' length 55605 bytes (54 KB)
    ==================================================
    downloaded 54 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/praise_1.0.0.tar.gz'
    Content type 'application/x-gzip' length 6100 bytes
    ==================================================
    downloaded 6100 bytes
    
    trying URL 'https://cloud.r-project.org/src/contrib/R6_2.4.0.tar.gz'
    Content type 'application/x-gzip' length 31545 bytes (30 KB)
    ==================================================
    downloaded 30 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/rlang_0.4.1.tar.gz'
    Content type 'application/x-gzip' length 797012 bytes (778 KB)
    ==================================================
    downloaded 778 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/withr_2.1.2.tar.gz'
    Content type 'application/x-gzip' length 53578 bytes (52 KB)
    ==================================================
    downloaded 52 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/pls_2.7-2.tar.gz'
    Content type 'application/x-gzip' length 4391977 bytes (4.2 MB)
    ==================================================
    downloaded 4.2 MB
    
    trying URL 'https://cloud.r-project.org/src/contrib/testthat_2.3.0.tar.gz'
    Content type 'application/x-gzip' length 247381 bytes (241 KB)
    ==================================================
    downloaded 241 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘ps’ ...
    ** package ‘ps’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -Wall px.c -o px
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c api-common.c -o api-common.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c common.c -o common.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c extra.c -o extra.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c dummy.c -o dummy.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o
    installing via 'install.libs.R' to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-ps/00new/ps
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (ps)
    * installing *source* package ‘backports’ ...
    ** package ‘backports’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c dotsElt.c -o dotsElt.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c dotsLength.c -o dotsLength.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o backports.so dotsElt.o dotsLength.o init.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-backports/00new/backports/libs
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (backports)
    * installing *source* package ‘assertthat’ ...
    ** package ‘assertthat’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (assertthat)
    * installing *source* package ‘rstudioapi’ ...
    ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (rstudioapi)
    * installing *source* package ‘crayon’ ...
    ** package ‘crayon’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (crayon)
    * installing *source* package ‘digest’ ...
    ** package ‘digest’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -xcache=generic -nofstore -c SpookyV2.cpp -o SpookyV2.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c aes.c -o aes.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c crc32.c -o crc32.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c digest.c -o digest.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c digest2int.c -o digest2int.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c md5.c -o md5.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c pmurhash.c -o pmurhash.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c raes.c -o raes.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c sha1.c -o sha1.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c sha2.c -o sha2.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c sha256.c -o sha256.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -xcache=generic -nofstore -c spooky_serialize.cpp -o spooky_serialize.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c xxhash.c -o xxhash.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -G -L/usr/local/lib -o digest.so SpookyV2.o aes.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-digest/00new/digest/libs
    ** R
    ** demo
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (digest)
    * installing *source* package ‘evaluate’ ...
    ** package ‘evaluate’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (evaluate)
    * installing *source* package ‘magrittr’ ...
    ** package ‘magrittr’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (magrittr)
    * installing *source* package ‘praise’ ...
    ** package ‘praise’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (praise)
    * installing *source* package ‘R6’ ...
    ** package ‘R6’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (R6)
    * installing *source* package ‘rlang’ ...
    ** package ‘rlang’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I./lib/ -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c lib.c -o lib.o
    "lib/node.c", line 72: warning: statement not reached
    "lib/squash.c", line 231: warning: statement not reached
    "lib/squash.c", line 282: warning: statement not reached
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I./lib/ -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c internal.c -o internal.o
    "internal/expr-interp.c", line 96: warning: statement not reached
    "internal/expr-interp.c", line 103: warning: statement not reached
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I./lib/ -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c export.c -o export.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I./lib/ -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c capture.c -o capture.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-rlang/00new/rlang/libs
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    *** copying figures
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (rlang)
    * installing *source* package ‘withr’ ...
    ** package ‘withr’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (withr)
    * installing *source* package ‘pls’ ...
    ** package ‘pls’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** data
    *** moving datasets to lazyload DB
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (pls)
    * installing *source* package ‘processx’ ...
    ** package ‘processx’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -Wall tools/px.c -o tools/px
    /home/ripley/developerstudio12.6/bin/cc -xc99 -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore supervisor/supervisor.c supervisor/utils.c \
     -o supervisor/supervisor
    supervisor/supervisor.c:
    "supervisor/supervisor.c", line 452: warning: statement not reached
    supervisor/utils.c:
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c base64.c -o base64.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c client.c -o client.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c errors.c -o errors.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o client.so base64.o client.o errors.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c poll.c -o poll.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c processx-connection.c -o processx-connection.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c processx-vector.c -o processx-vector.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c create-time.c -o create-time.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/childlist.c -o unix/childlist.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/connection.c -o unix/connection.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/processx.c -o unix/processx.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/sigchld.c -o unix/sigchld.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/utils.c -o unix/utils.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unix/named_pipe.c -o unix/named_pipe.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o
    installing via 'install.libs.R' to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-processx/00new/processx
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (processx)
    * installing *source* package ‘prettyunits’ ...
    ** package ‘prettyunits’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (prettyunits)
    * installing *source* package ‘rprojroot’ ...
    ** package ‘rprojroot’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (rprojroot)
    * installing *source* package ‘cli’ ...
    ** package ‘cli’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (cli)
    * installing *source* package ‘ellipsis’ ...
    ** package ‘ellipsis’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c dots.c -o dots.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o ellipsis.so dots.o init.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-ellipsis/00new/ellipsis/libs
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (ellipsis)
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    * installing *source* package ‘callr’ ...
    ** package ‘callr’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (callr)
    * installing *source* package ‘desc’ ...
    ** package ‘desc’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (desc)
    * installing *source* package ‘pkgbuild’ ...
    ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (pkgbuild)
    * installing *source* package ‘pkgload’ ...
    ** package ‘pkgload’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c unlock.c -o unlock.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -G -L/usr/local/lib -o pkgload.so unlock.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-pkgload/00new/pkgload/libs
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (pkgload)
    * installing *source* package ‘testthat’ ...
    ** package ‘testthat’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c init.c -o init.o
    /home/ripley/developerstudio12.6/bin/cc -xc99 -I"/home/ripley/R/cc/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -KPIC -O -xlibmieee -xlibmil -xtarget=native -xcache=generic -nofstore -c reassign.c -o reassign.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -I"/home/ripley/R/cc/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -xcache=generic -nofstore -c test-catch.cpp -o test-catch.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -I"/home/ripley/R/cc/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -xcache=generic -nofstore -c test-example.cpp -o test-example.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -I"/home/ripley/R/cc/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -KPIC -O -xlibmil -xtarget=native -xcache=generic -nofstore -c test-runner.cpp -o test-runner.o
    /home/ripley/developerstudio12.6/bin/CC -std=c++11 -library=stdcpp,CrunG3 -G -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o
    installing to /tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/folder1/00LOCK-testthat/00new/testthat/libs
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    *** copying figures
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (testthat)
    
    The downloaded source packages are in
     '/tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/downloaded_packages'
    * installing *source* package ‘dummyPackage’ ...
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (dummyPackage)
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/downloaded_packages'
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/downloaded_packages'
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/tmp/Rtmpp1aO3B/working_dir/RtmpPqaa9O/downloaded_packages'
    Error: processing vignette 'help.Rmd' failed with diagnostics:
    there is no package called ‘markdown’
    --- failed re-building ‘help.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘help.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘help.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/crayon_1.3.4.tgz'
    Content type 'application/x-gzip' length 750230 bytes (732 KB)
    ==================================================
    downloaded 732 KB
    
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/digest_0.6.18.tgz'
    Content type 'application/x-gzip' length 188369 bytes (183 KB)
    ==================================================
    downloaded 183 KB
    
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/magrittr_1.5.tgz'
    Content type 'application/x-gzip' length 155017 bytes (151 KB)
    ==================================================
    downloaded 151 KB
    
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/praise_1.0.0.tgz'
    Content type 'application/x-gzip' length 16397 bytes (16 KB)
    ==================================================
    downloaded 16 KB
    
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/R6_2.4.0.tgz'
    Content type 'application/x-gzip' length 57214 bytes (55 KB)
    ==================================================
    downloaded 55 KB
    
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.6/withr_2.1.2.tgz'
    Content type 'application/x-gzip' length 152917 bytes (149 KB)
    ==================================================
    downloaded 149 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/assertthat_0.2.1.tar.gz'
    Content type 'application/x-gzip' length 12742 bytes (12 KB)
    ==================================================
    downloaded 12 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/cli_1.1.0.tar.gz'
    Content type 'application/x-gzip' length 40232 bytes (39 KB)
    ==================================================
    downloaded 39 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/rlang_0.3.4.tar.gz'
    Content type 'application/x-gzip' length 858992 bytes (838 KB)
    ==================================================
    downloaded 838 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/pls_2.7-1.tar.gz'
    Content type 'application/x-gzip' length 4390103 bytes (4.2 MB)
    ==================================================
    downloaded 4.2 MB
    
    trying URL 'https://cloud.r-project.org/src/contrib/testthat_2.0.1.tar.gz'
    Content type 'application/x-gzip' length 217071 bytes (211 KB)
    ==================================================
    downloaded 211 KB
    
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘assertthat’ ...
    ** package ‘assertthat’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (assertthat)
    * installing *source* package ‘rlang’ ...
    ** package ‘rlang’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c export.c -o export.o
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c internal.c -o internal.o
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -I/usr/local/include -fPIC -Wall -g -O2 -c lib.c -o lib.o
    clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
    installing to /private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/folder1/00LOCK-rlang/00new/rlang/libs
    generating debug symbols (dSYM)
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    *** copying figures
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (rlang)
    * installing *source* package ‘pls’ ...
    ** package ‘pls’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** data
    *** moving datasets to lazyload DB
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (pls)
    * installing *source* package ‘cli’ ...
    ** package ‘cli’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (cli)
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    * installing *source* package ‘testthat’ ...
    ** package ‘testthat’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** libs
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
    clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fPIC -Wall -g -O2 -c reassign.c -o reassign.o
    clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fPIC -Wall -g -O2 -c test-catch.cpp -o test-catch.o
    clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fPIC -Wall -g -O2 -c test-example.cpp -o test-example.o
    clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fPIC -Wall -g -O2 -c test-runner.cpp -o test-runner.o
    clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
    installing to /private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/folder1/00LOCK-testthat/00new/testthat/libs
    generating debug symbols (dSYM)
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    *** copying figures
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** checking absolute paths in shared objects and dynamic libraries
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (testthat)
    
    The downloaded source packages are in
     '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/downloaded_packages'
    * installing *source* package ‘dummyPackage’ ...
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (dummyPackage)
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/downloaded_packages'
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/downloaded_packages'
    trying URL 'https://cloud.r-project.org/src/contrib/apercu_0.2.3.tar.gz'
    Content type 'application/x-gzip' length 7010 bytes
    ==================================================
    downloaded 7010 bytes
    
    * installing *source* package ‘apercu’ ...
    ** package ‘apercu’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
    ** building package indices
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation path
    * DONE (apercu)
    
    The downloaded source packages are in
     '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmphXMbzT/downloaded_packages'
    Error: processing vignette 'help.Rmd' failed with diagnostics:
    there is no package called ‘markdown’
    --- failed re-building ‘help.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘help.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.0.5
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Error in loadNamespace(name) : there is no package called 'devtools'
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.5/apercu_0.2.3.tgz'
    Content type 'application/x-gzip' length 27068 bytes (26 KB)
    ==================================================
    downloaded 26 KB
    
    Error in loadNamespace(name) : there is no package called 'BiocManager'
    Error in loadNamespace(name) : there is no package called 'devtools'
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.5/apercu_0.2.3.tgz'
    Content type 'application/x-gzip' length 27068 bytes (26 KB)
    ==================================================
    downloaded 26 KB
    
    Error in loadNamespace(name) : there is no package called 'BiocManager'
    Error in loadNamespace(name) : there is no package called 'devtools'
    trying URL 'https://cloud.r-project.org/bin/macosx/el-capitan/contrib/3.5/apercu_0.2.3.tgz'
    Content type 'application/x-gzip' length 27068 bytes (26 KB)
    ==================================================
    downloaded 26 KB
    
    Error in loadNamespace(name) : there is no package called 'BiocManager'
    Error in loadNamespace(name) : there is no package called 'devtools'
    Error: processing vignette 'help.Rmd' failed with diagnostics:
    there is no package called ‘markdown’
    Execution halted
Flavor: r-oldrel-osx-x86_64