CRAN Package Check Results for Package metacoder

Last updated on 2020-02-27 06:47:59 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.3 25.12 113.60 138.72 OK
r-devel-linux-x86_64-debian-gcc 0.3.3 19.54 85.94 105.48 OK
r-devel-linux-x86_64-fedora-clang 0.3.3 174.87 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.3 174.68 NOTE
r-devel-windows-ix86+x86_64 0.3.3 55.00 170.00 225.00 OK
r-devel-windows-ix86+x86_64-gcc8 0.3.3 59.00 184.00 243.00 ERROR
r-patched-linux-x86_64 0.3.3 24.31 99.13 123.44 OK
r-patched-solaris-x86 0.3.3 215.70 NOTE
r-release-linux-x86_64 0.3.3 23.43 99.36 122.79 OK
r-release-windows-ix86+x86_64 0.3.3 53.00 160.00 213.00 OK
r-release-osx-x86_64 0.3.3 NOTE
r-oldrel-windows-ix86+x86_64 0.3.3 37.00 164.00 201.00 OK
r-oldrel-osx-x86_64 0.3.3 NOTE

Check Details

Version: 0.3.3
Check: package dependencies
Result: NOTE
    Imports includes 30 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.3
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘ggrepel’ ‘reshape’ ‘svglite’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.3.3
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'testthat.R' [30s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     >
     > suppressPackageStartupMessages(library(metacoder))
     >
     > test_check("metacoder")
     -- 1. Error: Converting to phyloseq (@test--parsers_and_writers.R#202) --------
     package or namespace load failed for 'phyloseq' in library.dynam(lib, package, package.lib):
     DLL 'Rhdf5lib' not found: maybe not installed for this architecture?
     Backtrace:
     1. base::library(phyloseq)
     2. base::tryCatch(...)
     3. base:::tryCatchList(expr, classes, parentenv, handlers)
     4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. value[[3L]](cond)
    
     == testthat results ===========================================================
     [ OK: 95 | SKIPPED: 1 | WARNINGS: 1 | FAILED: 1 ]
     1. Error: Converting to phyloseq (@test--parsers_and_writers.R#202)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64-gcc8