CRAN Package Check Results for Package rbi.helpers

Last updated on 2019-10-23 15:47:36 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.1 9.22 77.05 86.27 OK
r-devel-linux-x86_64-debian-gcc 0.3.1 6.78 63.76 70.54 OK
r-devel-linux-x86_64-fedora-clang 0.3.1 97.47 OK
r-devel-linux-x86_64-fedora-gcc 0.3.1 97.45 OK
r-devel-windows-ix86+x86_64 0.3.1 18.00 142.00 160.00 WARN
r-patched-linux-x86_64 0.3.1 7.48 73.59 81.07 OK
r-patched-solaris-x86 0.3.1 189.20 ERROR
r-release-linux-x86_64 0.3.1 7.49 74.04 81.53 OK
r-release-windows-ix86+x86_64 0.3.1 21.00 94.00 115.00 OK
r-release-osx-x86_64 0.3.1 OK
r-oldrel-windows-ix86+x86_64 0.3.1 14.00 118.00 132.00 OK
r-oldrel-osx-x86_64 0.3.1 OK

Check Details

Version: 0.3.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'introduction.Rmd.rsp' using rsp
    Warning in parseRepos(sets = repos, where = where, fallback = fallback, :
     Had to fall back to a set of predefined repositories (please make sure to set your package repositories properly, cf. ?setRepositories): CRAN: '@CRAN@' -> 'http://cran.r-project.org'
    Error: processing vignette 'introduction.Rmd.rsp' failed with diagnostics:
    Failed to install package: knitr
    --- failed re-building 'introduction.Rmd.rsp'
    
    SUMMARY: processing the following file failed:
     'introduction.Rmd.rsp'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.3.1
Check: examples
Result: ERROR
    Running examples in ‘rbi.helpers-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: DIC
    > ### Title: Compute Deviance Information Criterion (DIC) for a libbi model
    > ### Aliases: DIC DIC.libbi
    >
    > ### ** Examples
    >
    > example_run <- bi_read(system.file(package="rbi", "example_output.nc"))
    Error in R_nc4_open: NetCDF: HDF error
    Error in nc_open(tools::file_path_as_absolute(x)) :
     Error in nc_open trying to open file /home/ripley/R/Lib32/rbi/example_output.nc
    Calls: bi_read -> bi_open -> nc_open
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.3.1
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(rbi.helpers)
     Loading required package: rbi
    
     Attaching package: 'rbi'
    
     The following objects are masked from 'package:stats':
    
     filter, optimise, predict, simulate, update
    
     The following object is masked from 'package:utils':
    
     fix
    
     The following object is masked from 'package:base':
    
     sample
    
     >
     > test_check("rbi.helpers")
     Error in R_nc4_open: NetCDF: HDF error
     ── 1. Error: (unknown) (@test-DIC.r#3) ────────────────────────────────────────
     Error in nc_open trying to open file /home/ripley/R/Lib32/rbi/example_output.nc
     1: bi_read(system.file(package = "rbi", "example_output.nc")) at testthat/test-DIC.r:3
     2: bi_open(x)
     3: nc_open(tools::file_path_as_absolute(x))
     4: stop(paste("Error in nc_open trying to open file", filename))
    
     Error in R_nc4_open: NetCDF: HDF error
     ── 2. Error: (unknown) (@test-adapt.r#4) ──────────────────────────────────────
     Error in nc_open trying to open file /home/ripley/R/Lib32/rbi/example_output.nc
     1: bi_read(system.file(package = "rbi", "example_output.nc")) at testthat/test-adapt.r:4
     2: bi_open(x)
     3: nc_open(tools::file_path_as_absolute(x))
     4: stop(paste("Error in nc_open trying to open file", filename))
    
     Error in R_nc4_open: NetCDF: HDF error
     ── 3. Error: (unknown) (@test-times.r#3) ──────────────────────────────────────
     Error in nc_open trying to open file /home/ripley/R/Lib32/rbi/example_output.nc
     1: bi_read(system.file(package = "rbi", "example_output.nc")) at testthat/test-times.r:3
     2: bi_open(x)
     3: nc_open(tools::file_path_as_absolute(x))
     4: stop(paste("Error in nc_open trying to open file", filename))
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 1 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-DIC.r#3)
     2. Error: (unknown) (@test-adapt.r#4)
     3. Error: (unknown) (@test-times.r#3)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86