openVA: Automated Method for Verbal Autopsy

Implements multiple existing open-source algorithms for coding cause of death from verbal autopsies. The methods implemented include 'InterVA4' by Byass et al (2012) <doi:10.3402/gha.v5i0.19281>, 'InterVA5' by Byass at al (2019) <doi:10.1186/s12916-019-1333-6>, 'InSilicoVA' by McCormick et al (2016) <doi:10.1080/01621459.2016.1152191>, 'NBC' by Miasnikof et al (2015) <doi:10.1186/s12916-015-0521-2>, and a replication of 'Tariff' method by James et al (2011) <doi:10.1186/1478-7954-9-31> and Serina, et al. (2015) <doi:10.1186/s12916-015-0527-9>. It also provides tools for data manipulation tasks commonly used in Verbal Autopsy analysis and implements easy graphical visualization of individual and population level statistics. Note that this package was not developed by authors affiliated with the Institute for Health Metrics and Evaluation and thus unintentional discrepancies may exist in the implementation of the 'Tariff' method.

Version: 1.0.9
Depends: R (≥ 3.1)
Imports: InterVA5 (≥ 1.0.1), InSilicoVA (≥ 1.1.3), InterVA4 (≥ 1.7.3), Tariff (≥ 1.0.1), ggplot2, crayon, cli, methods
Suggests: nbc4va, testthat
Published: 2020-02-18
Author: Zehang Richard Li, Tyler McCormick, Sam Clark
Maintainer: Zehang Richard Li <lizehang at gmail.com>
BugReports: https://github.com/verbal-autopsy-software/openVA/issues
License: GPL-2
URL: https://github.com/verbal-autopsy-software/openVA
NeedsCompilation: no
Materials: NEWS
CRAN checks: openVA results

Downloads:

Reference manual: openVA.pdf
Package source: openVA_1.0.9.tar.gz
Windows binaries: r-devel: openVA_1.0.8.zip, r-devel-gcc8: openVA_1.0.9.zip, r-release: openVA_1.0.9.zip, r-oldrel: openVA_1.0.9.zip
OS X binaries: r-release: openVA_1.0.9.tgz, r-oldrel: openVA_1.0.9.tgz
Old sources: openVA archive

Reverse dependencies:

Reverse suggests: CrossVA
Reverse enhances: nbc4va

Linking:

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